基于网络药理学、分子对接与实验验证探讨熊果酸治疗矽肺纤维化的作用机制
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1.宁夏医科大学公共卫生学院,银川 750004;2.国家卫生健康委员会代谢性心血管疾病研究重点实验室,银川 750004;3.宁夏环境因素与慢性病控制重点实验室,银川 750004

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R-33

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Exploring the mechanism of ursolic acid in the treatment of silicosis fibrosis based on network pharmacology, molecular docking, and experimental validation
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1. School of Public Health, Ningxia Medical University, Yinchuan 750004, China. 2. Key Laboratory of Metabolic Cardiovascular Disease Research, National Health Commission, Yinchuan 750004.3. Ningxia Key Laboratory of Environmental Factors and Chronic Disease Control, Yinchuan 750004

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    摘要:

    目的 基于网络药理学、分子对接及体外实验探究熊果酸抗矽肺纤维化的作用机制。 方法通过 GeneCards、PubChem 等数据库获取熊果酸作用靶点;检索疾病相关数据库(GeneCards、OMIM)获得矽肺纤维化及上皮间质转化(EMT)相关靶点。 利用微生信平台筛选交集靶点,通过 STRING 数据库和 Cytoscape构建蛋白互作网络,筛选核心靶点;采用 David 数据库进行 GO 和 KEGG 富集分析;运用 AutoDock 进行分子对接验证。 通过 beas-2B 细胞实验验证关键靶点。 结果 获得熊果酸作用靶点 179 个,矽肺纤维化及 EMT 相关靶点分别为 8023 个和 6809 个,交集靶点 133 个。 筛选出 AKT、STAT3、MMP9 等 9 个核心靶点,其中 MMP9 和AKT 在 PPI 网络中具有最高连接度。 分子对接显示熊果酸与 MMP9(结合能-8. 4 kJ/ mol)、AKT(结合能-7. 9kJ/ mol)具有强结合活性。 KEGG 分析提示 PI3K-AKT 信号通路为关键调控通路。 体外实验表明,熊果酸显著抑制 SiO2 诱导的细胞活力下降(CCK8);降低 p-AKT 表达(Western blot,P<0. 05);下调纤维化标志物 α-SMA和间质标志 Vimentin 表达,同时上调上皮标志物 E-cadherin 表达(免疫荧光/ Western blot,P<0. 05)。 结论熊果酸可能通过抑制 AKT 磷酸化及 MMP9 表达,调控 EMT 进程,从而发挥抗矽肺纤维化作用。

    Abstract:

    Objective To explore the therapeutic mechanism of ursolic acid against silicosis fibrosis based on network pharmacology, molecular docking and in vitro experiments. Methods Ursolic acid targets were obtained from databases, including GeneCards and PubChem. Disease-related databases (GeneCards, OMIM) were searched for targets related to silicosis fibrosis and epithelial-mesenchymal transition ( EMT). A micro-biotech platform was used to screen for intersecting targets, and a protein-protein interaction network was constructed using the STRING database and Cytoscape to screen the core targets. The David database was used for GO and KEGG enrichment analysis. AutoDock was used for molecular docking validation. Key targets were validated using beas-2B cells. ResultsWe obtained 179 ursolic acid targets, 8023 silicosis fibrosis targets, 6809 EMT-related targets, and 133 intersecting targets. Nine core targets, including AKT, STAT3, and MMP9, were identified, among which MMP9 and AKT had the highest connectivity in the protein-protein interaction network. Molecular docking showed that ursolic acid had strong binding activity with MMP9 ( binding energy - 8. 4 kJ/ mol) and AKT ( binding energy - 7. 9 kJ/mol). KEGG analysis indicated the PI3K-AKT signaling pathway to be a key regulatory pathway. In vitro experiments showed that ursolic acid significantly inhibited the decrease in cell viability induced by SiO2 (CCK8). Ursolic acid also reduced p-AKT expression (Western blot,P<0. 05); downregulated expression of the fibrosis marker α-SMA and the mesenchymal marker Vimentin, while upregulated expression of the epithelial marker E-cadherin (immunofluorescence / Western blot,P<0. 05). Conclusions Ursolic acid may play an anti-silicosis fibrosis role by inhibiting AKT phosphorylation, reducing MMP9 levels and regulating EMT.

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张虎宁,张文月,温升鹏,畅思容,郭 怡,宝 瑞,孙 岳,杨安宁,刘志宏.基于网络药理学、分子对接与实验验证探讨熊果酸治疗矽肺纤维化的作用机制[J].中国比较医学杂志,2025,35(12):1~12.

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  • 收稿日期:2025-03-25
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  • 在线发布日期: 2026-01-29
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